Lifescience Global

International Journal of Statistics in Medical Research

Application of Generalized Additive Models to the Evaluation of Continuous Markers for Classification Purposes
Pages 296-305
Mónica López-Ratón, Mar Rodríguez-Girondo, María Xosé Rodríguez-Álvarez, Carmen Cadarso-Suárez and Francisco Gude
DOI:
http://dx.doi.org/10.6000/1929-6029.2015.04.03.8
Published: 19 August 2015


Abstract: Background: Receiver operating characteristic (ROC) curve and derived measures as the Area Under the Curve (AUC) are often used for evaluating the discriminatory capability of a continuous biomarker in distinguishing between alternative states of health. However, if the marker shows an irregular distribution, with a dominance of diseased subjects in noncontiguous regions, classification using a single cutpoint is not appropriate, and it would lead to erroneous conclusions. This study sought to describe a procedure for improving the discriminatory capacity of a continuous biomarker, by using generalized additive models (GAMs) for binary data.

Methods: A new classification rule is obtained by using logistic GAM regression models to transform the original biomarker, with the predicted probabilities being the new transformed continuous biomarker. We propose using this transformed biomarker to establish optimal cut-offs or intervals on which to base the classification. This methodology is applied to different controlled scenarios, and to real data from a prospective study of patients undergoing surgery at a University Teaching Hospital, for examining plasma glucose as postoperative infection biomarker.

Results: Both, theoretical scenarios and real data results show that when the risk marker-disease relationship is not monotone, using the new transformed biomarker entails an improvement in discriminatory capacity. Moreover, in these situations, an optimal interval seems more reasonable than a single cutpoint to define lower and higher disease-risk categories.

Conclusions: Using statistical tools which allow for greater flexibility (e.g., GAMs) can optimize the classificatory capacity of a potential marker using ROC analysis. So, it is important to question linearity in marker-outcome relationships, in order to avoid erroneous conclusions.

Keywords: Discriminatory capability, ROC, AUC, optimal cutpoint, biomarker, plasma glucose.
Download Full Article
Submit to FacebookSubmit to Google PlusSubmit to TwitterSubmit to LinkedIn

OUR STRENGTHS

♦  Worldwide readership
♦  High quality content
♦  Maximum visibility
♦  Efficient publishing
♦  Optional Open Access

Publish your Research

Survey

As an author what type of publishing model you prefer?

780
Open Access
493
Optional Open Access
338
Subscription based
5 Votes left